STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP70613.1PFAM: protein of unknown function DUF140. (366 aa)    
Predicted Functional Partners:
ABP70612.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 0.999
ABP70611.1
PFAM: Mammalian cell entry related domain protein.
 
 0.998
ABP69967.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.988
ABP70345.1
PFAM: Mammalian cell entry related domain protein.
  
 0.985
ABP70610.1
ABC-type uncharacterized transport system auxiliary component-like protein.
 
  
 0.953
ABP69968.1
PFAM: protein of unknown function DUF140.
  
  
 
0.913
ABP69028.1
PFAM: toluene tolerance family protein.
  
 
 0.877
ABP69172.1
Hypothetical protein.
     
  0.800
ABP70685.1
Hypothetical protein.
   
   0.777
ABP71792.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
   
   0.777
Your Current Organism:
Rhodobacter sphaeroides ATCC 17025
NCBI taxonomy Id: 349102
Other names: R. sphaeroides ATCC 17025, Rhodobacter sphaeroides str. ATCC 17025, Rhodobacter sphaeroides strain ATCC 17025
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