STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP71392.1PFAM: ATP12 ATPase. (235 aa)    
Predicted Functional Partners:
ABP71393.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
    0.897
ABP70344.1
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit.
  
     0.698
ABP71394.1
Recombination protein MgsA; PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
       0.628
ABP71391.1
TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3.
       0.623
ABP71766.1
PFAM: ETC complex I subunit conserved region.
  
     0.606
ABP71521.1
Hypothetical protein.
  
     0.584
ABP69756.1
Hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein.
  
     0.573
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
    0.563
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 
 0.561
rplQ
PFAM: ribosomal protein L17.
 
     0.535
Your Current Organism:
Rhodobacter sphaeroides ATCC 17025
NCBI taxonomy Id: 349102
Other names: R. sphaeroides ATCC 17025, Rhodobacter sphaeroides str. ATCC 17025, Rhodobacter sphaeroides strain ATCC 17025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.