Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ94155.1 | ABQ94156.1 | PsycPRwf_1206 | PsycPRwf_1207 | Arsenite efflux ATP-binding protein ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; TC 3.A.4.1.1. | Hypothetical protein. | 0.919 |
ABQ94155.1 | ABQ94157.1 | PsycPRwf_1206 | PsycPRwf_1208 | Arsenite efflux ATP-binding protein ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; TC 3.A.4.1.1. | PFAM: carbon starvation protein CstA. | 0.856 |
ABQ94156.1 | ABQ94155.1 | PsycPRwf_1207 | PsycPRwf_1206 | Hypothetical protein. | Arsenite efflux ATP-binding protein ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; TC 3.A.4.1.1. | 0.919 |
ABQ94156.1 | ABQ94157.1 | PsycPRwf_1207 | PsycPRwf_1208 | Hypothetical protein. | PFAM: carbon starvation protein CstA. | 0.884 |
ABQ94156.1 | ABQ94648.1 | PsycPRwf_1207 | PsycPRwf_1708 | Hypothetical protein. | PFAM: short chain fatty acid transporter. | 0.424 |
ABQ94157.1 | ABQ94155.1 | PsycPRwf_1208 | PsycPRwf_1206 | PFAM: carbon starvation protein CstA. | Arsenite efflux ATP-binding protein ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; TC 3.A.4.1.1. | 0.856 |
ABQ94157.1 | ABQ94156.1 | PsycPRwf_1208 | PsycPRwf_1207 | PFAM: carbon starvation protein CstA. | Hypothetical protein. | 0.884 |
ABQ94157.1 | ABQ94648.1 | PsycPRwf_1208 | PsycPRwf_1708 | PFAM: carbon starvation protein CstA. | PFAM: short chain fatty acid transporter. | 0.537 |
ABQ94648.1 | ABQ94156.1 | PsycPRwf_1708 | PsycPRwf_1207 | PFAM: short chain fatty acid transporter. | Hypothetical protein. | 0.424 |
ABQ94648.1 | ABQ94157.1 | PsycPRwf_1708 | PsycPRwf_1208 | PFAM: short chain fatty acid transporter. | PFAM: carbon starvation protein CstA. | 0.537 |