Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Hhal_0154 | Hhal_0155 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | 0.983 |
Hhal_0154 | Hhal_0156 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2819 hypothetical protein. | 0.919 |
Hhal_0154 | Hhal_0157 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF879; KEGG: pca:Pcar_2818 hypothetical protein. | 0.961 |
Hhal_0154 | Hhal_0158 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF1316; KEGG: reu:Reut_B5259 protein of unknown function DUF1316. | 0.868 |
Hhal_0154 | Hhal_0159 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF796; KEGG: pca:Pcar_2816 secreted protein Hcp. | 0.931 |
Hhal_0154 | Hhal_0160 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF877; KEGG: pca:Pcar_2815 hypothetical protein. | 0.933 |
Hhal_0154 | Hhal_0161 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: Uncharacterised conserved protein UCP028301; KEGG: pca:Pcar_2814 hypothetical protein. | 0.962 |
Hhal_0154 | Hhal_0162 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: ImpA domain protein; KEGG: pca:Pcar_2813 hypothetical protein. | 0.932 |
Hhal_0154 | Hhal_0164 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2810 hypothetical protein. | 0.934 |
Hhal_0154 | Hhal_0166 | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2808 hypothetical protein. | 0.926 |
Hhal_0155 | Hhal_0154 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | Conserved hypothetical protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | 0.983 |
Hhal_0155 | Hhal_0156 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2819 hypothetical protein. | 0.939 |
Hhal_0155 | Hhal_0157 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF879; KEGG: pca:Pcar_2818 hypothetical protein. | 0.966 |
Hhal_0155 | Hhal_0158 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF1316; KEGG: reu:Reut_B5259 protein of unknown function DUF1316. | 0.877 |
Hhal_0155 | Hhal_0159 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF796; KEGG: pca:Pcar_2816 secreted protein Hcp. | 0.944 |
Hhal_0155 | Hhal_0160 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: protein of unknown function DUF877; KEGG: pca:Pcar_2815 hypothetical protein. | 0.945 |
Hhal_0155 | Hhal_0161 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: Uncharacterised conserved protein UCP028301; KEGG: pca:Pcar_2814 hypothetical protein. | 0.973 |
Hhal_0155 | Hhal_0162 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | PFAM: ImpA domain protein; KEGG: pca:Pcar_2813 hypothetical protein. | 0.935 |
Hhal_0155 | Hhal_0164 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2810 hypothetical protein. | 0.937 |
Hhal_0155 | Hhal_0166 | TIGRFAM: Rhs element Vgr protein; KEGG: pca:Pcar_2821 rhs element protein VgrE. | KEGG: pca:Pcar_2808 hypothetical protein. | 0.933 |
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