STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1516KEGG: aeh:Mlg_0142 hypothetical protein. (343 aa)    
Predicted Functional Partners:
Hhal_1514
TIGRFAM: eight transmembrane protein EpsH; Eight transmembrane protein EpsH; KEGG: aeh:Mlg_0140 eight transmembrane protein EpsH.
 
     0.956
Hhal_1515
KEGG: aeh:Mlg_0141 glycosyl transferase, group 1.
 
     0.956
Hhal_1513
PFAM: glycosyl transferase, group 1; KEGG: aeh:Mlg_0139 glycosyl transferase, group 1.
 
     0.948
Hhal_1509
PFAM: glycosyl transferase, group 1; KEGG: aeh:Mlg_0136 glycosyl transferase, group 1.
 
     0.941
Hhal_1510
PFAM: glycosyl transferase, group 1; KEGG: rru:Rru_A3107 glycosyl transferase, group 1.
 
     0.936
Hhal_1517
PFAM: polysaccharide deacetylase; KEGG: aeh:Mlg_0143 polysaccharide deacetylase.
 
   
 0.928
Hhal_1511
CoA ligase; KEGG: aeh:Mlg_0135 CoA ligase.
 
     0.922
Hhal_1512
KEGG: aeh:Mlg_0138 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase.
 
     0.913
Hhal_1520
KEGG: aeh:Mlg_0146 hypothetical protein.
 
     0.890
Hhal_1521
PFAM: lipopolysaccharide biosynthesis; KEGG: aeh:Mlg_0147 lipopolysaccharide biosynthesis.
 
     0.886
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (34%) [HD]