STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_1988TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE2037 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (362 aa)    
Predicted Functional Partners:
Hhal_1990
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aeh:Mlg_0943 type I secretion outer membrane protein, TolC family.
 
 0.987
Hhal_1738
PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_1187 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.986
Hhal_1989
PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0211 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.969
Hhal_1875
PFAM: outer membrane efflux protein; KEGG: aeh:Mlg_0651 outer membrane efflux protein.
 
 0.967
Hhal_1739
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aeh:Mlg_1186 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.927
Hhal_1876
PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_0652 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.882
Hhal_1917
PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1574 protein of unknown function DUF214.
  
 
 0.832
Hhal_2294
PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_0731 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.801
Hhal_0258
PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_1210 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.674
fur-4
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: aeh:Mlg_0939 ferric uptake regulator, Fur family; Belongs to the Fur family.
     
 0.597
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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