STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2176Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1952 ABC transporter related. (509 aa)    
Predicted Functional Partners:
Dred_2175
Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: mta:Moth_1951 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Dred_2174
Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: mta:Moth_1950 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Dred_2767
Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: mta:Moth_1951 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
Dred_2177
PFAM: basic membrane lipoprotein; KEGG: mta:Moth_1953 basic membrane lipoprotein.
 
 
 0.989
Dred_2766
PFAM: inner-membrane translocator; KEGG: mlo:mll4174 sugar ABC transporter, permease protein, rbsC-2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
Dred_2769
PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein.
 
 
 0.983
Dred_2523
PFAM: inner-membrane translocator; KEGG: bcl:ABC3545 ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
     0.923
Dred_2768
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0703 sugar ABC-transporter, ATP-ase component.
  
  
 
0.905
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
       0.750
Dred_1722
PFAM: inner-membrane translocator; KEGG: gsu:GSU3393 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
      0.508
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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