node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dred_1707 | Dred_2492 | Dred_1707 | Dred_2492 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | 0.745 |
Dred_1707 | Dred_2493 | Dred_1707 | Dred_2493 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.571 |
Dred_1707 | Dred_3218 | Dred_1707 | Dred_3218 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: Fmu (Sun) domain protein; KEGG: gka:GK1767 hypothetical protein. | 0.592 |
Dred_1707 | dnaJ | Dred_1707 | Dred_2495 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.461 |
Dred_1707 | prmA | Dred_1707 | Dred_2494 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.750 |
Dred_2491 | Dred_2492 | Dred_2491 | Dred_2492 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | 0.803 |
Dred_2491 | Dred_2493 | Dred_2491 | Dred_2493 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.864 |
Dred_2491 | dnaJ | Dred_2491 | Dred_2495 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.617 |
Dred_2491 | grpE | Dred_2491 | Dred_2497 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.575 |
Dred_2491 | hrcA | Dred_2491 | Dred_2499 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.447 |
Dred_2491 | prmA | Dred_2491 | Dred_2494 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.683 |
Dred_2491 | rpsU | Dred_2491 | Dred_2490 | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | PFAM: ribosomal protein S21; KEGG: dsy:DSY3123 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.681 |
Dred_2492 | Dred_1707 | Dred_2492 | Dred_1707 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.745 |
Dred_2492 | Dred_2491 | Dred_2492 | Dred_2491 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | PFAM: histidine triad (HIT) protein; KEGG: cac:CAC1287 HIT family hydrolase. | 0.803 |
Dred_2492 | Dred_2493 | Dred_2492 | Dred_2493 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.930 |
Dred_2492 | dnaJ | Dred_2492 | Dred_2495 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.781 |
Dred_2492 | grpE | Dred_2492 | Dred_2497 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.504 |
Dred_2492 | hrcA | Dred_2492 | Dred_2499 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.487 |
Dred_2492 | prmA | Dred_2492 | Dred_2494 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.955 |
Dred_2492 | rpsU | Dred_2492 | Dred_2490 | RNA modification enzyme, MiaB family; KEGG: mta:Moth_0588 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB. | PFAM: ribosomal protein S21; KEGG: dsy:DSY3123 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.601 |