STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2670TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; Thioredoxin domain; KEGG: dsy:DSY4471 hypothetical protein. (410 aa)    
Predicted Functional Partners:
Dred_1749
Thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY1359 hypothetical protein.
 
0.955
Dred_1736
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: chy:CHY_0906 thioredoxin-disulfide reductase.
 
0.945
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.935
Dred_2669
PFAM: glutaredoxin 2; Thioredoxin domain; KEGG: dsy:DSY0403 hypothetical protein.
  
 
 0.920
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 
 0.828
Dred_2145
KEGG: ava:Ava_4779 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.827
Dred_0904
TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: sth:STH2404 thioredoxin; Belongs to the thioredoxin family.
 
 
 0.814
Dred_0762
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mta:Moth_1673 thioredoxin; Belongs to the thioredoxin family.
 
 
 0.812
Dred_2805
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bha:BH1728 glutamate synthase (large subunit).
   
 
 0.768
Dred_2421
NADH:flavin oxidoreductase/NADH oxidase; Metal reductase able to reduce Fe(III)-chelates to Fe(II)- chelates, as well as soluble Cr(VI) and U(VI), using NADH as electron donor. Cannot use NADPH as an electron donor. Is unable to reduce riboflavin and FMN with NADH as electron donor. May have an in vivo role in metal reduction in D.reducens, which is an organism capable of reducing contaminant heavy metals and radionuclides.
 
 
 0.766
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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