STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acry_0103PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein. (733 aa)    
Predicted Functional Partners:
Acry_0104
PFAM: Tetratricopeptide TPR_2 repeat protein.
  
 
 0.802
Acry_1060
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
 0.728
Acry_0105
PFAM: protein of unknown function DUF1217.
 
     0.695
Acry_0102
PFAM: aminotransferase, class I and II.
       0.675
Acry_2412
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
 0.588
Acry_3051
Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4.
  
     0.510
Acry_1523
Non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein.
     
 0.451
Acry_0106
Hypothetical protein.
       0.426
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.