Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acry_0615 | Acry_0749 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | Hypothetical protein. | 0.741 |
Acry_0615 | Acry_1214 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.541 |
Acry_0615 | Acry_1215 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase. | 0.647 |
Acry_0615 | Acry_1216 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related. | 0.601 |
Acry_0615 | Acry_1217 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain. | 0.532 |
Acry_0615 | Acry_1218 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | PFAM: glycosyl transferase, family 2. | 0.711 |
Acry_0615 | Acry_2515 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | Hypothetical protein. | 0.772 |
Acry_0615 | Acry_2524 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | PFAM: Baseplate J family protein. | 0.766 |
Acry_0615 | Acry_2526 | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | Hypothetical protein. | 0.756 |
Acry_0749 | Acry_0615 | Hypothetical protein. | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | 0.741 |
Acry_0749 | Acry_1218 | Hypothetical protein. | PFAM: glycosyl transferase, family 2. | 0.524 |
Acry_0749 | Acry_2515 | Hypothetical protein. | Hypothetical protein. | 0.761 |
Acry_0749 | Acry_2524 | Hypothetical protein. | PFAM: Baseplate J family protein. | 0.751 |
Acry_0749 | Acry_2526 | Hypothetical protein. | Hypothetical protein. | 0.728 |
Acry_1213 | Acry_1214 | Hypothetical protein. | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.475 |
Acry_1213 | Acry_1215 | Hypothetical protein. | TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase. | 0.475 |
Acry_1213 | Acry_1216 | Hypothetical protein. | TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related. | 0.475 |
Acry_1213 | Acry_1217 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain. | 0.476 |
Acry_1213 | Acry_1218 | Hypothetical protein. | PFAM: glycosyl transferase, family 2. | 0.475 |
Acry_1214 | Acry_0615 | TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1. | 0.541 |
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