STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acry_2668Hypothetical protein. (399 aa)    
Predicted Functional Partners:
Acry_0105
PFAM: protein of unknown function DUF1217.
 
 
 0.886
Acry_2960
PFAM: O-antigen polymerase.
 
  
 0.882
Acry_2964
PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.847
Acry_2968
PFAM: polysaccharide deacetylase.
 
   
 0.841
Acry_2963
PFAM: polysaccharide export protein.
 
  
 0.834
Acry_3083
PFAM: protein of unknown function DUF214.
   
 
 0.819
Acry_2969
Hypothetical protein.
 
   
 0.810
Acry_2291
PFAM: polysaccharide biosynthesis protein.
 
  
 0.803
Acry_2959
PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
 
     0.802
Acry_1040
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR.
  
  
 0.798
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.