STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_1077PFAM: glycosyl transferase, family 2; KEGG: mhu:Mhun_2117 glycosyl transferase, family 2. (298 aa)    
Predicted Functional Partners:
Mthe_1079
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pfu:PF1357 UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase.
 
  
 0.840
Mthe_1081
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mhu:Mhun_2113 UDP-glucose 6-dehydrogenase.
  
  
 0.787
Mthe_1080
UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mhu:Mhun_3079 UTP-glucose-1-phosphate uridylyltransferase.
     
 0.769
Mthe_1078
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mja:MJ1614 hypothetical protein.
     
 0.756
Mthe_1082
PFAM: conserved hypothetical protein 374; KEGG: bja:bll5419 hypothetical protein.
  
  
 0.662
Mthe_1083
PFAM: Protein of unknown function DUF1616; KEGG: mbu:Mbur_2008 protein of unknown function DUF1616.
 
     0.660
Mthe_1073
PFAM: glycosyl transferase, group 1; KEGG: jan:Jann_4283 glycosyl transferase, group 1.
 
  
 0.617
Mthe_1084
Hypothetical protein.
       0.583
Mthe_1066
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1177 polysaccharide ABC transporter, ATP-binding protein.
 
  
 0.544
Mthe_1065
PFAM: ABC-2 type transporter; KEGG: mac:MA1176 polysaccharide ABC transporter, permease protein.
 
  
 0.527
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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