STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mthe_1616Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: mhu:Mhun_2315 ribulose-bisphosphate carboxylase. (390 aa)    
Predicted Functional Partners:
Mthe_0884
Phosphoglycolate phosphatase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
 0.902
Mthe_0684
Carbonate dehydratase; KEGG: dsy:DSY1994 hypothetical protein.
   
 
 0.748
Mthe_1691
KEGG: tfu:Tfu_0193 similar to carbonic anhydrase/acetyltransferase isoleucine patch superfamily.
   
 
 0.748
Mthe_1450
PFAM: class II aldolase/adducin family protein; KEGG: mba:Mbar_A1249 L-fuculose-phosphate aldolase.
  
  
 0.727
Mthe_0365
Translation initiation factor 2B subunit I family (IF-2BI); Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.
  
  
 0.697
Mthe_1447
PFAM: phosphoribulokinase/uridine kinase; KEGG: mhu:Mhun_0794 phosphoribulokinase/uridine kinase.
 
   
 0.670
Mthe_1262
Ribose 1,5-bisphosphate isomerase; KEGG: mba:Mbar_A0793 translation initiation factor 2B, subunit 2; TIGRFAM: putative translation initiation factor, aIF-2BII family; eIF-2B alpha/beta/delta-related uncharacterized proteins; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
   
 0.606
Mthe_0462
AMP phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
 
   
 0.538
Mthe_1614
PFAM: V-type ATPase, 116 kDa subunit; KEGG: mma:MM0785 A1AO H+ ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
       0.501
Mthe_1615
KEGG: mac:MA4152 H(+)-transporting ATP synthase, subunit H.
       0.501
Your Current Organism:
Methanothrix thermoacetophila
NCBI taxonomy Id: 349307
Other names: M. thermoacetophila PT, Methanosaeta thermophila PT, Methanothrix thermoacetophila PT, Methanothrix thermophila DSM 6194, Methanothrix thermophila PT
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