Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCK_01218 | LCK_01484 | LCK_01218 | LCK_01484 | PTS system, fructose-specific IIABC component; COG1299G. | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | 0.500 |
LCK_01218 | adhE | LCK_01218 | LCK_00119 | PTS system, fructose-specific IIABC component; COG1299G. | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.547 |
LCK_01218 | fucP | LCK_01218 | LCK_01483 | PTS system, fructose-specific IIABC component; COG1299G. | L-fucose permease; COG0738G; TIGR00885. | 0.457 |
LCK_01482 | LCK_01484 | LCK_01482 | LCK_01484 | Similar to lyase. | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | 0.428 |
LCK_01482 | adhE | LCK_01482 | LCK_00119 | Similar to lyase. | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.499 |
LCK_01482 | fucP | LCK_01482 | LCK_01483 | Similar to lyase. | L-fucose permease; COG0738G; TIGR00885. | 0.728 |
LCK_01484 | LCK_01218 | LCK_01484 | LCK_01218 | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | PTS system, fructose-specific IIABC component; COG1299G. | 0.500 |
LCK_01484 | LCK_01482 | LCK_01484 | LCK_01482 | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | Similar to lyase. | 0.428 |
LCK_01484 | adhE | LCK_01484 | LCK_00119 | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.411 |
LCK_01484 | fucP | LCK_01484 | LCK_01483 | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | L-fucose permease; COG0738G; TIGR00885. | 0.450 |
adhE | LCK_01218 | LCK_00119 | LCK_01218 | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | PTS system, fructose-specific IIABC component; COG1299G. | 0.547 |
adhE | LCK_01482 | LCK_00119 | LCK_01482 | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Similar to lyase. | 0.499 |
adhE | LCK_01484 | LCK_00119 | LCK_01484 | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | 0.411 |
adhE | fucP | LCK_00119 | LCK_01483 | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | L-fucose permease; COG0738G; TIGR00885. | 0.467 |
fucP | LCK_01218 | LCK_01483 | LCK_01218 | L-fucose permease; COG0738G; TIGR00885. | PTS system, fructose-specific IIABC component; COG1299G. | 0.457 |
fucP | LCK_01482 | LCK_01483 | LCK_01482 | L-fucose permease; COG0738G; TIGR00885. | Similar to lyase. | 0.728 |
fucP | LCK_01484 | LCK_01483 | LCK_01484 | L-fucose permease; COG0738G; TIGR00885. | Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O. | 0.450 |
fucP | adhE | LCK_01483 | LCK_00119 | L-fucose permease; COG0738G; TIGR00885. | Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.467 |