STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucPL-fucose permease; COG0738G; TIGR00885. (443 aa)    
Predicted Functional Partners:
LCK_01482
Similar to lyase.
  
    0.728
adhE
Alcohol dehydrogensae; COG1012C; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.467
LCK_01218
PTS system, fructose-specific IIABC component; COG1299G.
   
  
 0.457
LCK_01484
Trypsin-like serine protease; Typically periplasmic, contains C-terminal PDZ domain; COG0265O.
       0.450
Your Current Organism:
Leuconostoc citreum
NCBI taxonomy Id: 349519
Other names: L. citreum KM20, Leuconostoc citreum KM20, Leuconostoc citreum str. KM20, Leuconostoc citreum strain KM20
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