STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02328Adenylate cyclase, family 3; COG2114; some protein contain HAMP domain. (733 aa)    
Predicted Functional Partners:
HCH_04641
Adenylate cyclase, family 3; COG2114; some protein contain HAMP domain.
 
  
0.943
HCH_03370
Adenylate cyclase, family 3; COG2114; some protein contain HAMP domain.
 
  
 0.940
HCH_04487
Adenylate cyclase, family 3; COG2114; some protein contain HAMP domain.
 
  
0.929
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.913
HCH_00295
Adenylate cyclase; COG3072.
     
 0.911
cpdA
Predicted phosphohydrolase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
     
 0.911
pyk
Pyruvate kinase; TIGRFAMsMatches:TIGR01064; Belongs to the pyruvate kinase family.
   
 0.905
HCH_02326
Conserved hypothetical protein.
 
     0.902
relA
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.900
HCH_01808
Predicted pyrophosphatase; COG1694.
     
  0.900
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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