Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HCH_00085 | HCH_00086 | Probable secreted endoclucanase precursor. | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | 0.972 |
HCH_00085 | HCH_02464 | Probable secreted endoclucanase precursor. | Probable cellulase. | 0.953 |
HCH_00085 | HCH_03914 | Probable secreted endoclucanase precursor. | Endoglucanase; COG2730; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.982 |
HCH_00085 | HCH_04439 | Probable secreted endoclucanase precursor. | Protein containing QXW lectin repeats. | 0.756 |
HCH_00085 | HCH_04441 | Probable secreted endoclucanase precursor. | Protein containing QXW lectin repeats. | 0.771 |
HCH_00085 | HCH_05453 | Probable secreted endoclucanase precursor. | Chitinase; COG3469. | 0.788 |
HCH_00085 | HCH_06825 | Probable secreted endoclucanase precursor. | Beta-glucosidase-related Glycosidase; COG1472; Belongs to the glycosyl hydrolase 3 family. | 0.973 |
HCH_00085 | HCH_06907 | Probable secreted endoclucanase precursor. | Beta-glucosidase/6-phospho-beta- glucosidase/beta- galactosidase; COG2723. | 0.935 |
HCH_00086 | HCH_00085 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Probable secreted endoclucanase precursor. | 0.972 |
HCH_00086 | HCH_02464 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Probable cellulase. | 0.953 |
HCH_00086 | HCH_03914 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Endoglucanase; COG2730; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.988 |
HCH_00086 | HCH_04439 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Protein containing QXW lectin repeats. | 0.771 |
HCH_00086 | HCH_04441 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Protein containing QXW lectin repeats. | 0.777 |
HCH_00086 | HCH_05453 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Chitinase; COG3469. | 0.805 |
HCH_00086 | HCH_06825 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Beta-glucosidase-related Glycosidase; COG1472; Belongs to the glycosyl hydrolase 3 family. | 0.953 |
HCH_00086 | HCH_06907 | Cellobiohydrolase A (1,4-beta-cellobiosidase A); COG5297; Belongs to the glycosyl hydrolase family 6. | Beta-glucosidase/6-phospho-beta- glucosidase/beta- galactosidase; COG2723. | 0.959 |
HCH_00807 | HCH_02464 | Putative chitin/cellulose binding protein. | Probable cellulase. | 0.719 |
HCH_00807 | HCH_03914 | Putative chitin/cellulose binding protein. | Endoglucanase; COG2730; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.654 |
HCH_00807 | HCH_04439 | Putative chitin/cellulose binding protein. | Protein containing QXW lectin repeats. | 0.754 |
HCH_00807 | HCH_04441 | Putative chitin/cellulose binding protein. | Protein containing QXW lectin repeats. | 0.755 |
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