STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_02799Aspartate/tyrosine/aromatic aminotransferase; COG1448. (394 aa)    
Predicted Functional Partners:
hppD
4-hydroxyphenylpyruvate dioxygenase; TIGRFAMsMatches:TIGR01263.
  
 
 0.963
phhA
Phenylalanine-4-hydroxylase; TIGRFAMsMatches:TIGR01267.
  
 
 0.961
mdh
Malate/lactate dehydrogenase; COG0039; Belongs to the LDH/MDH superfamily.
  
 0.955
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.952
HCH_04981
Prephenate dehydratase; COG0077.
    
 0.952
argG
Argininosuccinate synthase; TIGRFAMsMatches:TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.932
HCH_05965
Glutamate synthase domain 2; COG0069.
    
 0.932
argA
Amino-acid N-acetyltransferase; TIGRFAMsMatches:TIGR01890; Belongs to the acetyltransferase family. ArgA subfamily.
     
 0.931
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.930
HCH_06095
Prephenate dehydratase; COG0077.
    
 0.927
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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