STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_04873Lactoylglutathione lyase; COG0346. (136 aa)    
Predicted Functional Partners:
HCH_04874
Predicted dehydrogenase and related protein; COG0673.
     
 0.750
HCH_04872
Predicted phosphatase; COG2110; similar to the C-terminal domain of histone macroH2A1.
       0.623
HCH_02844
Conserved hypothetical protein.
  
     0.562
HCH_02023
Conserved hypothetical protein.
  
     0.556
HCH_04875
Methyl-accepting chemotaxis protein; COG0840.
       0.512
gloB
Zn-dependent Hydrolase, including glyoxylases; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
  0.499
HCH_02845
Permease of the major facilitator superfamily; COG0477.
 
     0.437
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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