STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_04903Conserved hypothetical protein. (243 aa)    
Predicted Functional Partners:
HCH_05242
Outer membrane protein; COG2825.
    
 
 0.674
napC
Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; COG3005.
  
 
 0.649
HCH_03667
Conserved hypothetical protein.
  
 
 0.649
HCH_02169
Predicted xylanase/chitin deacetylase; COG0726.
  
     0.638
HCH_05292
Uncharacterized FlgJ-related protein; COG2992.
  
     0.583
HCH_00750
Chromosome segregation ATPase; COG1196.
  
     0.565
HCH_01449
Conserved hypothetical protein.
   
    0.551
HCH_04902
Nucleoside-diphosphate-sugar epimerase; COG0451.
  
    0.533
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
    
 
 0.532
HCH_01922
Membrane protein required for beta-lactamase induction; COG3725.
  
     0.529
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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