STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCH_05754Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; COG0318. (611 aa)    
Predicted Functional Partners:
HCH_05753
Short-chain alcohol dehydrogenase-like protein; COG1028; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.964
HCH_05750
Acyl-CoA dehydrogenase; COG1960.
 
 
  0.949
HCH_05746
Short-chain alcohol dehydrogenase-like protein; COG1028.
 
 
  0.946
HCH_03491
Polyketide synthase modules and related protein; COG3321.
 
 0.927
HCH_02966
Polyketide synthase modules and related protein; COG3321.
 
 0.923
HCH_02957
Non-ribosomal peptide synthetase modules and related protein; COG1020.
 
 
 0.872
nuoF
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; COG1894.
    
 
 0.843
fadB
3-hydroxyacyl-CoA dehydrogenase; COG1250; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.802
HCH_03484
Polyketide synthase modules and related protein; COG3321.
 
 0.800
HCH_03447
Polyketide synthase modules and related protein; COG3321.
 
 0.781
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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