STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde-2,1-aminomutase; TIGRFAMsMatches:TIGR00713. (426 aa)    
Predicted Functional Partners:
HCH_00650
Delta-aminolevulinic acid dehydratase; COG0113; Belongs to the ALAD family.
 
 
 0.988
HCH_01004
Delta-aminolevulinic acid dehydratase; COG0113; Belongs to the ALAD family.
 
 
 0.988
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.986
HCH_02963
Polyketide synthase modules and related protein; COG3321.
 
  
 0.947
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.944
HCH_02964
Non-ribosomal peptide synthetase modules and related protein; COG1020.
  
 
 0.927
HCH_04831
Glutamate-1-semialdehyde aminotransferase; COG0001; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.923
HCH_05045
Non-ribosomal peptide synthetase modules and related protein; COG1020.
  
 
 0.923
HCH_02965
Polyketide synthase modules and related protein; COG3321.
    
 0.921
HCH_02960
Non-ribosomal peptide synthetase modules and related protein; COG1020; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.917
Your Current Organism:
Hahella chejuensis
NCBI taxonomy Id: 349521
Other names: H. chejuensis KCTC 2396, Hahella chejuensis KCTC 2396, Hahella chejuensis str. KCTC 2396, Hahella chejuensis strain KCTC 2396
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