Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HCH_00114 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.836 |
HCH_00636 | HCH_04672 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.401 |
HCH_00636 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.824 |
HCH_01630 | HCH_04672 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.400 |
HCH_01630 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.821 |
HCH_01952 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.836 |
HCH_02787 | HCH_04672 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.404 |
HCH_02787 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.835 |
HCH_04242 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.836 |
HCH_04672 | HCH_00636 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.401 |
HCH_04672 | HCH_01630 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.400 |
HCH_04672 | HCH_02787 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein kinase; COG0515. | 0.404 |
HCH_04672 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.857 |
HCH_04887 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.832 |
HCH_06123 | HCH_06863 | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit COG0022. | Serine/threonine protein phosphatase; COG0631. | 0.848 |
HCH_06862 | HCH_06863 | Serine/threonine protein kinase; COG0515. | Serine/threonine protein phosphatase; COG0631. | 0.930 |
HCH_06863 | HCH_00114 | Serine/threonine protein phosphatase; COG0631. | Serine/threonine protein kinase; COG0515. | 0.836 |
HCH_06863 | HCH_00636 | Serine/threonine protein phosphatase; COG0631. | Serine/threonine protein kinase; COG0515. | 0.824 |
HCH_06863 | HCH_01630 | Serine/threonine protein phosphatase; COG0631. | Serine/threonine protein kinase; COG0515. | 0.821 |
HCH_06863 | HCH_01952 | Serine/threonine protein phosphatase; COG0631. | Serine/threonine protein kinase; COG0515. | 0.836 |
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