STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glaAHypothetical protein; Alpha-galactosidase that specifically removes branched alpha- 1,3-linked galactose residues present in blood group B antigens. Has no activity toward linear alpha-1,3-linked galactose residues (By similarity). (596 aa)    
Predicted Functional Partners:
Amuc_0803
PFAM: coagulation factor 5/8 type domain protein; KEGG: pdi:BDI_2427 hypothetical protein.
 
     0.748
Amuc_0455
PFAM: lipolytic protein G-D-S-L family; KEGG: pdi:BDI_2948 sialate O-acetylesterase.
  
 
   0.723
Amuc_1793
PFAM: acyltransferase 3; KEGG: pdi:BDI_3314 acyltransferase.
  
     0.706
Amuc_2065
PFAM: acyltransferase 3; KEGG: bvu:BVU_1181 hypothetical protein.
  
     0.703
Amuc_1259
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_2651 putative O-antigen related protein.
  
 
   0.698
Amuc_0773
PFAM: acyltransferase 3; KEGG: fjo:Fjoh_3387 acyltransferase 3.
  
     0.672
Amuc_1879
KEGG: bth:BT_2255 hypothetical protein.
  
     0.605
Amuc_0539
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: bfs:BF1672 putative beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.573
Amuc_0052
Hyalurononglucosaminidase; PFAM: coagulation factor 5/8 type domain protein; Hyaluronidase; KEGG: bfs:BF3796 putative exported hyaluronidase.
  
     0.559
Amuc_1464
PFAM: Squalene/phytoene synthase; KEGG: pol:Bpro_2017 squalene/phytoene synthase.
       0.550
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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