STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amuc_1835Exo-alpha-sialidase; KEGG: pdi:BDI_2946 glycoside hydrolase family 33, candidate sialidase. (674 aa)    
Predicted Functional Partners:
Amuc_0625
Exo-alpha-sialidase; KEGG: rba:RB3353 sialidase [precursor].
  
  
0.945
Amuc_0855
PFAM: glycoside hydrolase clan GH-D; KEGG: bfs:BF0498 putative melibiase.
     
  0.900
Amuc_1187
KEGG: bth:BT_3592 alpha-galactosidase precursor.
     
  0.900
Amuc_0454
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: bfs:BF1809 sialate O-acetylesterase.
 
     0.873
Amuc_0803
PFAM: coagulation factor 5/8 type domain protein; KEGG: pdi:BDI_2427 hypothetical protein.
 
  
 0.777
Amuc_1425
PFAM: Kelch repeat-containing protein; KEGG: rba:RB3349 conserved hypothetical protein-putative sodium:solute symporter.
 
     0.777
Amuc_1947
PFAM: N-acylglucosamine 2-epimerase; KEGG: rba:RB3348 N-acylglucosamine 2-epimerase.
 
     0.760
Amuc_1946
PFAM: dihydrodipicolinate synthetase; KEGG: rba:RB3352 probable N-acetylneuraminate lyase; Belongs to the DapA family.
 
   
 0.747
Amuc_1259
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_2651 putative O-antigen related protein.
 
   
 0.738
Amuc_1815
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: pdi:BDI_2947 glycoside hydrolase family 20.
 
 
 0.733
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
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