STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mflv_1176KEGG: mva:Mvan_5629 putative conserved transmembrane protein. (620 aa)    
Predicted Functional Partners:
Mflv_1175
PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5630 cell wall arabinan synthesis protein.
 
  
 0.996
Mflv_1173
PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5632 cell wall arabinan synthesis protein.
 
 
 0.988
Mflv_1174
PFAM: cell wall arabinan synthesis protein; KEGG: mva:Mvan_5631 cell wall arabinan synthesis protein.
 
  
 0.985
Mflv_1177
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5628 short-chain dehydrogenase/reductase SDR.
 
   
 0.960
Mflv_3915
KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein.
  
   
 0.940
Mflv_1163
KEGG: mva:Mvan_5646 conserved hypothetical protein.
 
   
 0.939
Mflv_1178
PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_5627 FAD linked oxidase domain protein.
 
   
 0.932
Mflv_1179
PFAM: GtrA family protein; KEGG: mva:Mvan_5626 GtrA family protein.
 
   
 0.895
Mflv_1160
KEGG: mva:Mvan_5649 glycosyltransferases-like protein.
 
  
 0.846
Mflv_0418
KEGG: mva:Mvan_0253 putative conserved transmembrane protein.
  
   
 0.825
Your Current Organism:
Mycolicibacterium gilvum
NCBI taxonomy Id: 350054
Other names: M. gilvum PYR-GCK, Mycobacterium flavescens ATCC 700033, Mycobacterium flavescens PYR-GCK, Mycobacterium gilvum PYR-GCK, Mycolicibacterium gilvum PYR-GCK
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