node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mflv_1063 | Mflv_3561 | Mflv_1063 | Mflv_3561 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | 0.960 |
Mflv_1063 | Mflv_3921 | Mflv_1063 | Mflv_3921 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease. | 0.960 |
Mflv_1063 | Mflv_4676 | Mflv_1063 | Mflv_4676 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | 0.747 |
Mflv_1063 | rph | Mflv_1063 | Mflv_2358 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.815 |
Mflv_1063 | rpsD | Mflv_1063 | Mflv_4971 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.969 |
Mflv_1063 | rpsE | Mflv_1063 | Mflv_5030 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.925 |
Mflv_1063 | rpsK | Mflv_1063 | Mflv_4972 | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.944 |
Mflv_2359 | rph | Mflv_2359 | Mflv_2358 | Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.990 |
Mflv_2634 | Mflv_3921 | Mflv_2634 | Mflv_3921 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family. | PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease. | 0.616 |
Mflv_2634 | Mflv_4676 | Mflv_2634 | Mflv_4676 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | 0.843 |
Mflv_2634 | pnp | Mflv_2634 | Mflv_4023 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.953 |
Mflv_2634 | rph | Mflv_2634 | Mflv_2358 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mmc:Mmcs_3551 ribonuclease, Rne/Rng family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.840 |
Mflv_3561 | Mflv_1063 | Mflv_3561 | Mflv_1063 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | KEGG: mva:Mvan_5766 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like. | 0.960 |
Mflv_3561 | Mflv_3921 | Mflv_3561 | Mflv_3921 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mmc:Mmcs_2210 3'-5' exonuclease. | 0.980 |
Mflv_3561 | Mflv_4676 | Mflv_3561 | Mflv_4676 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mmc:Mmcs_1393 DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | 0.718 |
Mflv_3561 | pnp | Mflv_3561 | Mflv_4023 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.692 |
Mflv_3561 | rph | Mflv_3561 | Mflv_2358 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.906 |
Mflv_3561 | rpsD | Mflv_3561 | Mflv_4971 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
Mflv_3561 | rpsE | Mflv_3561 | Mflv_5030 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
Mflv_3561 | rpsK | Mflv_3561 | Mflv_4972 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: mva:Mvan_3356 RNA binding S1 domain protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |