STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_0064PFAM: protein of unknown function DUF55; KEGG: mmc:Mmcs_0055 protein of unknown function DUF55; Belongs to the UPF0310 family. (145 aa)    
Predicted Functional Partners:
Mvan_0063
Hypothetical protein; KEGG: mmu:22376 Wiskott-Aldrich syndrome homolog (human).
       0.580
Mvan_0065
KEGG: mmc:Mmcs_0056 hypothetical protein.
       0.550
Mvan_0066
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mmc:Mmcs_2679 propionyl-CoA carboxylase.
       0.550
Mvan_0062
PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: mpa:MAP0031c hypothetical protein; Belongs to the pirin family.
       0.517
Mvan_0061
KEGG: mmc:Mmcs_0054 hypothetical protein.
       0.508
Mvan_0060
KEGG: mmc:Mmcs_0053 hypothetical protein.
       0.465
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.