STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1643PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1270 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (514 aa)    
Predicted Functional Partners:
Mvan_1644
PFAM: protein of unknown function DUF1338; KEGG: mbo:Mb3320 hypothetical protein.
 
    0.974
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.925
Mvan_1483
KEGG: mmc:Mmcs_1145 glutamate decarboxylase; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; Belongs to the group II decarboxylase family.
   
 0.921
Mvan_2206
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mmc:Mmcs_1989 FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 
 0.916
Mvan_2080
PFAM: alanine dehydrogenase/PNT domain protein; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_1836 alcohol dehydrogenase GroES-like protein.
  
 
 0.913
Mvan_0108
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmc:Mmcs_0093 haloacid dehalogenase, type II.
  
 
 0.908
acyP
PFAM: acylphosphatase; KEGG: mmc:Mmcs_1952 acylphosphatase.
    
 0.908
Mvan_3569
PFAM: glycerate kinase; KEGG: mbo:Mb2228c glycerate kinase; Belongs to the glycerate kinase type-1 family.
   
 
 0.908
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.908
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
    
 0.904
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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