STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2581TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: mmc:Mmcs_2274 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)    
Predicted Functional Partners:
Mvan_3160
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xtr:549387 nitrilase family, member 2 Pfam: CN_hydrolase PROSITE: CN_HYDROLASE.
 
 
 0.936
Mvan_1483
KEGG: mmc:Mmcs_1145 glutamate decarboxylase; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; Belongs to the group II decarboxylase family.
  
 0.934
Mvan_1362
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1064 methylmalonate-semialdehyde dehydrogenase.
  
 0.932
Mvan_1824
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0348 methylmalonate-semialdehyde dehydrogenase.
  
 0.932
Mvan_1844
PFAM: aldehyde dehydrogenase; KEGG: dra:DRA0343 succinic-semialdehyde dehydrogenase, putative.
  
 0.932
Mvan_4876
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_4333 succinate-semialdehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
  
 0.932
Mvan_2918
PFAM: aminotransferase class-III; KEGG: sme:SMc02413 putative aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.918
Mvan_0915
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit.
   
 0.917
Mvan_5066
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
   
 0.917
Mvan_2582
TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mmc:Mmcs_2275 preprotein translocase, YajC subunit.
     
 0.915
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.