STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFUrease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (214 aa)    
Predicted Functional Partners:
Mvan_3079
KEGG: mmc:Mmcs_2802 putative urease accessory protein.
 
 
 0.999
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.994
ureC
Urease, Metallo peptidase, MEROPS family M38; KEGG: mmc:Mmcs_2805 urease, alpha subunit; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
 
 0.993
ureB
KEGG: mmc:Mmcs_2806 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; Belongs to the urease beta subunit family.
 
 
 0.987
ureA
KEGG: mmc:Mmcs_2807 urease, gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease, gamma subunit region; Belongs to the urease gamma subunit family.
 
 
 0.971
Mvan_2357
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: cdi:DIP0671 putative hydrogenase nickel incorporation protein.
  
 
 0.889
Mvan_2417
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: mmc:Mmcs_2145 hydrogenase accessory protein HypB.
  
 
 0.889
Mvan_2452
KEGG: mmc:Mmcs_2178 hypothetical protein.
  
     0.629
Mvan_3085
TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: mmc:Mmcs_2808 phenylacetic acid degradation-related protein.
       0.610
Mvan_0537
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1677 transcriptional regulator, MarR family.
     
 0.575
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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