STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3099Prostaglandin-endoperoxide synthase; PFAM: Animal haem peroxidase; KEGG: neu:NE1240 putative cyclooxygenase-2. (528 aa)    
Predicted Functional Partners:
Mvan_3098
PFAM: von Willebrand factor, type A; KEGG: mmc:Mmcs_2818 hypothetical protein.
       0.623
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
    0.509
Mvan_1264
PFAM: Collagen triple helix repeat; KEGG: mtc:MT3615.3 PE_PGRS family protein.
 
 
 0.491
Mvan_1075
PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_4347 FHA domain containing protein.
 
  
 0.485
Mvan_1509
KEGG: mmc:Mmcs_1165 hypothetical protein.
 
 
 0.433
Mvan_3100
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: nfa:nfa46180 putative alkane-1-monooxygenase.
       0.428
Mvan_2290
PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family.
 
     0.406
Mvan_3280
PFAM: O-methyltransferase, family 3; KEGG: mtc:MT1743 catechol-O-methyltransferase.
 
   
 0.406
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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