STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (373 aa)    
Predicted Functional Partners:
Mvan_3389
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2565 binding-protein-dependent transport systems inner membrane component.
 0.994
Mvan_3388
PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2566 twin-arginine translocation pathway signal.
 
 
 0.992
Mvan_3390
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2564 binding-protein-dependent transport systems inner membrane component.
 
 
 0.989
Mvan_5732
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1435 ABC transporter, permease protein.
 
  
 0.820
Mvan_6022
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB homolog.
 
  
 0.799
Mvan_2537
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.745
Mvan_5733
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0347 ABC transporter, inner membrane subunit.
 
  
 0.736
Mvan_5740
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_5125 binding-protein-dependent transport systems inner membrane component.
 
  
 0.624
Mvan_3873
TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3480 sulfate ABC transporter, permease protein CysW.
  
 0.550
Mvan_3092
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_1174 binding-protein-dependent transport systems inner membrane component.
  
 0.540
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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