node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mvan_0839 | rplF | Mvan_0839 | Mvan_1337 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
Mvan_0839 | rplM | Mvan_0839 | Mvan_1469 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
Mvan_0839 | rplU | Mvan_0839 | Mvan_3946 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
Mvan_0839 | rpsF | Mvan_0839 | Mvan_6034 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
Mvan_0839 | rpsI | Mvan_0839 | Mvan_1470 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | PFAM: ribosomal protein S9; KEGG: mmc:Mmcs_1131 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
Mvan_0839 | rpsJ | Mvan_0839 | Mvan_1304 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
Mvan_0839 | rpsL | Mvan_0839 | Mvan_1279 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
Mvan_0839 | rpsO | Mvan_0839 | Mvan_2349 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |
Mvan_0839 | rpsP | Mvan_0839 | Mvan_2187 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | PFAM: ribosomal protein S16; KEGG: mmc:Mmcs_1965 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
Mvan_0839 | rpsT | Mvan_0839 | Mvan_3912 | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.999 |
rplF | Mvan_0839 | Mvan_1337 | Mvan_0839 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein. | 0.999 |
rplF | rplM | Mvan_1337 | Mvan_1469 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplF | rplU | Mvan_1337 | Mvan_3946 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.996 |
rplF | rpsF | Mvan_1337 | Mvan_6034 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplF | rpsI | Mvan_1337 | Mvan_1470 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: ribosomal protein S9; KEGG: mmc:Mmcs_1131 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplF | rpsJ | Mvan_1337 | Mvan_1304 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rplF | rpsL | Mvan_1337 | Mvan_1279 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.997 |
rplF | rpsO | Mvan_1337 | Mvan_2349 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.996 |
rplF | rpsP | Mvan_1337 | Mvan_2187 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: ribosomal protein S16; KEGG: mmc:Mmcs_1965 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.995 |
rplF | rpsT | Mvan_1337 | Mvan_3912 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.995 |