node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mvan_0002 | Mvan_3913 | Mvan_0002 | Mvan_3913 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | 0.995 |
Mvan_0002 | nucS | Mvan_0002 | Mvan_4308 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.733 |
Mvan_0002 | rpoZ | Mvan_0002 | Mvan_2668 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.542 |
Mvan_1812 | Mvan_3132 | Mvan_1812 | Mvan_3132 | KEGG: mmc:Mmcs_1413 hypothetical protein. | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | 0.742 |
Mvan_1812 | Mvan_3913 | Mvan_1812 | Mvan_3913 | KEGG: mmc:Mmcs_1413 hypothetical protein. | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | 0.759 |
Mvan_1812 | nucS | Mvan_1812 | Mvan_4308 | KEGG: mmc:Mmcs_1413 hypothetical protein. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.710 |
Mvan_1812 | rbpA | Mvan_1812 | Mvan_3417 | KEGG: mmc:Mmcs_1413 hypothetical protein. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.742 |
Mvan_1812 | rpoZ | Mvan_1812 | Mvan_2668 | KEGG: mmc:Mmcs_1413 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.702 |
Mvan_1812 | whiB-2 | Mvan_1812 | Mvan_1734 | KEGG: mmc:Mmcs_1413 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.662 |
Mvan_1812 | whiB-4 | Mvan_1812 | Mvan_1782 | KEGG: mmc:Mmcs_1413 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.708 |
Mvan_3132 | Mvan_1812 | Mvan_3132 | Mvan_1812 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | KEGG: mmc:Mmcs_1413 hypothetical protein. | 0.742 |
Mvan_3132 | Mvan_3913 | Mvan_3132 | Mvan_3913 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | 0.731 |
Mvan_3132 | nucS | Mvan_3132 | Mvan_4308 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.747 |
Mvan_3132 | rbpA | Mvan_3132 | Mvan_3417 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.772 |
Mvan_3132 | rpoZ | Mvan_3132 | Mvan_2668 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.844 |
Mvan_3132 | whiB-2 | Mvan_3132 | Mvan_1734 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.841 |
Mvan_3132 | whiB-4 | Mvan_3132 | Mvan_1782 | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.777 |
Mvan_3913 | Mvan_0002 | Mvan_3913 | Mvan_0002 | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.995 |
Mvan_3913 | Mvan_1812 | Mvan_3913 | Mvan_1812 | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | KEGG: mmc:Mmcs_1413 hypothetical protein. | 0.759 |
Mvan_3913 | Mvan_3132 | Mvan_3913 | Mvan_3132 | PFAM: DNA polymerase III, delta; KEGG: mmc:Mmcs_3511 DNA polymerase III, delta subunit. | SMART: regulatory protein, MerR; KEGG: mmc:Mmcs_2841 transcriptional regulator, MerR family. | 0.731 |