node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplP | rplQ | Mvan_1312 | Mvan_1437 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | 0.999 |
rplP | rplS | Mvan_1312 | Mvan_2192 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.998 |
rplP | rplT | Mvan_1312 | Mvan_3326 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
rplP | rplV | Mvan_1312 | Mvan_1310 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
rplP | rpmF | Mvan_1312 | Mvan_4845 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mmc:Mmcs_4302 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.987 |
rplP | rpmI | Mvan_1312 | Mvan_3327 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | PFAM: ribosomal protein L35; KEGG: mbo:Mb1669 50S ribosomal protein l35 RpmI; Belongs to the bacterial ribosomal protein bL35 family. | 0.992 |
rplP | rpmJ | Mvan_1312 | Mvan_1432 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | PFAM: ribosomal protein L36; KEGG: mmc:Mmcs_1109 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.994 |
rplP | rpsO | Mvan_1312 | Mvan_2349 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplP | rpsP | Mvan_1312 | Mvan_2187 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | PFAM: ribosomal protein S16; KEGG: mmc:Mmcs_1965 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
rplP | tuf | Mvan_1312 | Mvan_1282 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.993 |
rplQ | rplP | Mvan_1437 | Mvan_1312 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplQ | rplS | Mvan_1437 | Mvan_2192 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
rplQ | rplT | Mvan_1437 | Mvan_3326 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
rplQ | rplV | Mvan_1437 | Mvan_1310 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
rplQ | rpmF | Mvan_1437 | Mvan_4845 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mmc:Mmcs_4302 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.991 |
rplQ | rpmI | Mvan_1437 | Mvan_3327 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | PFAM: ribosomal protein L35; KEGG: mbo:Mb1669 50S ribosomal protein l35 RpmI; Belongs to the bacterial ribosomal protein bL35 family. | 0.991 |
rplQ | rpmJ | Mvan_1437 | Mvan_1432 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | PFAM: ribosomal protein L36; KEGG: mmc:Mmcs_1109 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.994 |
rplQ | rpsO | Mvan_1437 | Mvan_2349 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplQ | rpsP | Mvan_1437 | Mvan_2187 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | PFAM: ribosomal protein S16; KEGG: mmc:Mmcs_1965 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplQ | tuf | Mvan_1437 | Mvan_1282 | PFAM: ribosomal protein L17; KEGG: mmc:Mmcs_1114 ribosomal protein L17. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.962 |