STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_5082PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_5395 serine/threonine protein kinase. (298 aa)    
Predicted Functional Partners:
Mvan_0027
PFAM: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_0019 protein serine/threonine phosphatases.
 
 0.903
Mvan_3135
PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_2844 FHA domain containing protein.
 
 
 
 0.897
Mvan_0023
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mmc:Mmcs_0015 serine/threonine protein kinase.
 
 
0.737
Mvan_0028
PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_0020 FHA domain containing protein.
 
 
 
 0.616
Mvan_5083
KEGG: mmc:Mmcs_4509 hypothetical protein.
       0.581
Mvan_5081
KEGG: mbo:Mb0328 possible conserved exported protein.
  
  
 0.547
Mvan_0029
PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_0021 FHA domain containing protein.
   
 
 0.510
Mvan_1075
PFAM: Forkhead-associated protein; KEGG: mmc:Mmcs_4347 FHA domain containing protein.
 
 
 
 0.497
Mvan_3515
PFAM: DivIVA family protein; KEGG: mmc:Mmcs_3248 DivIVA.
   
 
 0.491
Mvan_0026
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: cell cycle protein; KEGG: mmc:Mmcs_0018 cell cycle protein; Belongs to the SEDS family.
  
 
 0.471
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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