STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAKEGG: lxx:Lxx03370 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family. (407 aa)    
Predicted Functional Partners:
Mvan_5296
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2519 xylulokinase; Belongs to the FGGY kinase family.
 
 
 0.997
Mvan_0094
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
 
 0.966
Mvan_2625
PFAM: carbohydrate kinase, FGGY; KEGG: mmc:Mmcs_2422 carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
  
 
 0.953
Mvan_4916
PFAM: PfkB domain protein; KEGG: mmc:Mmcs_4360 PfkB.
 
  
 0.925
Mvan_2240
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2021 alcohol dehydrogenase, zinc-binding protein.
  
  
 0.922
Mvan_5590
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918 putative zinc-binding sorbitol dehydrogenase.
     
 0.910
Mvan_5293
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: tfu:Tfu_1922 solute-binding protein; TC 3.A.1.2.-.
 
  
 0.876
Mvan_5030
PFAM: glycoside hydrolase, family 1; KEGG: tko:TK1761 beta-glycosidase, GH1 family.
 
  
 0.863
Mvan_5292
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV2246 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.
 
  
 0.834
Mvan_5291
PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1920 putative ABC transporter transmembrane transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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