STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_5989Mn2+-dependent serine/threonine protein kinase. (496 aa)    
Predicted Functional Partners:
Mvan_5987
PFAM: von Willebrand factor, type A; KEGG: tel:tlr0974 hypothetical protein.
 
  
 0.915
Mvan_5990
KEGG: rsp:RSP_3492 protein phosphatase 2C-like.
     
 0.837
Mvan_5988
KEGG: plt:Plut_1597 hypothetical protein.
 
     0.791
Mvan_1092
KEGG: son:SO1461 protein kinase, putative.
 
   
 0.633
Mvan_1088
Type IV secretory pathway VirB4 components-like protein; KEGG: fal:FRAAL2645 hypothetical protein; putative IMP dehydrogenase / GMP reductase domain.
 
     0.631
Mvan_1700
PFAM: Methyltransferase type 11; Methyltransferase type 12.
  
     0.576
Mvan_5991
PFAM: Dual specificity protein phosphatase; KEGG: rno:503171 similar to Mucin 2 precursor (Intestinal mucin 2) (predicted).
       0.568
Mvan_2292
KEGG: mmc:Mmcs_2064 hypothetical protein.
  
     0.482
Mvan_5992
Hypothetical protein.
       0.421
Mvan_5993
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_2929 UBA/ThiF-type NAD/FAD binding protein.
       0.421
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.