STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_6036PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: mmc:Mmcs_5372 glycosyl transferase, family 51. (830 aa)    
Predicted Functional Partners:
Mvan_6035
KEGG: mmc:Mmcs_5371 hypothetical protein.
  
    0.885
Mvan_6037
KEGG: mmc:Mmcs_5373 hypothetical protein.
     
 0.821
Mvan_3515
PFAM: DivIVA family protein; KEGG: mmc:Mmcs_3248 DivIVA.
   
 
 0.799
Mvan_3524
Cell division-specific peptidoglycan biosynthesis regulator FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mmc:Mmcs_3257 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.784
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
 
     0.767
Mvan_3529
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: mmc:Mmcs_3262 peptidoglycan glycosyltransferase.
 
 
 
 0.760
Mvan_0026
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: cell cycle protein; KEGG: mmc:Mmcs_0018 cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.697
Mvan_0025
Cell elongation-specific peptidoglycan D,D-transpeptidase; PFAM: penicillin-binding protein, transpeptidase; KEGG: mmc:Mmcs_0017 peptidoglycan glycosyltransferase.
 
 
 
0.696
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.690
Mvan_6033
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mmc:Mmcs_5369 single-strand binding protein.
 
     0.682
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.