Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LRC375 | RCIX115 | LRC375 | RCIX115 | Predicted signal transduction protein. | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.517 |
LRC375 | RCIX117 | LRC375 | RCIX117 | Predicted signal transduction protein. | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.478 |
RCIX114 | RCIX115 | RCIX114 | RCIX115 | Conserved hypothetical protein. | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.897 |
RCIX114 | RCIX117 | RCIX114 | RCIX117 | Conserved hypothetical protein. | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.566 |
RCIX114 | gsp-4 | RCIX114 | RCIX112 | Conserved hypothetical protein. | Putative bacterial type II secretion system protein. | 0.804 |
RCIX114 | gsp-5 | RCIX114 | RCIX113 | Conserved hypothetical protein. | Putative bacterial type II secretion system protein. | 0.661 |
RCIX115 | LRC375 | RCIX115 | LRC375 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Predicted signal transduction protein. | 0.517 |
RCIX115 | RCIX114 | RCIX115 | RCIX114 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Conserved hypothetical protein. | 0.897 |
RCIX115 | RCIX117 | RCIX115 | RCIX117 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.479 |
RCIX115 | gsp-4 | RCIX115 | RCIX112 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Putative bacterial type II secretion system protein. | 0.663 |
RCIX115 | gsp-5 | RCIX115 | RCIX113 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Putative bacterial type II secretion system protein. | 0.637 |
RCIX116 | RCIX117 | RCIX116 | RCIX117 | Hypothetical protein. | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.792 |
RCIX116 | RCIX118 | RCIX116 | RCIX118 | Hypothetical protein. | Hypothetical protein. | 0.772 |
RCIX117 | LRC375 | RCIX117 | LRC375 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Predicted signal transduction protein. | 0.478 |
RCIX117 | RCIX114 | RCIX117 | RCIX114 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Conserved hypothetical protein. | 0.566 |
RCIX117 | RCIX115 | RCIX117 | RCIX115 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | 0.479 |
RCIX117 | RCIX116 | RCIX117 | RCIX116 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Hypothetical protein. | 0.792 |
RCIX117 | RCIX118 | RCIX117 | RCIX118 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Hypothetical protein. | 0.772 |
RCIX117 | RCIX1333 | RCIX117 | RCIX1333 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Conserved hypothetical protein. | 0.722 |
RCIX117 | gsp-4 | RCIX117 | RCIX112 | Conserved hypothetical protein; Similarities with kaiC (circadian clock regulatory protein kinase) and Rad55 (RecA-superfamily ATPase implicated in signal transduction). | Putative bacterial type II secretion system protein. | 0.459 |
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