STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfdBChaperonin cofactor prefoldin, beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. (126 aa)    
Predicted Functional Partners:
pfdA
Putative chaperonin cofactor prefoldin, alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
 
 0.999
rpoP
DNA-directed RNA polymerase, subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.
  
  
 0.908
fdhC
Putative formate transporter.
    
 
 0.846
hsp60-2
Chaperonin Hsp60 (GroEL-like); Belongs to the TCP-1 chaperonin family.
  
 
 0.839
hsp60-4
Chaperonin Hsp60 (GroEL-like); Belongs to the TCP-1 chaperonin family.
  
 
 0.839
hsp60-3
Chaperonin Hsp60 (GroEL-like); Belongs to the TCP-1 chaperonin family.
  
 
 0.838
RCIX2128
Conserved hypothetical protein.
  
    0.838
RCIX2122
Conserved hypothetical protein.
 
  
 0.835
hsp60-1
Chaperonin Hsp60 (GroEL-like); Belongs to the TCP-1 chaperonin family.
  
 
 0.831
RCIX1046
Conserved hypothetical protein; Belongs to the PDCD5 family.
 
   0.827
Your Current Organism:
Methanocella arvoryzae
NCBI taxonomy Id: 351160
Other names: M. arvoryzae MRE50, Methanocella arvoryzae MRE50, Methanocella arvoryzae str. MRE50, Methanocella arvoryzae strain MRE50, uncultured methanogenic archaeon RC-I, uncultured methanogenic archaeon Rice Cluster I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.