STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_35420Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (519 aa)    
Predicted Functional Partners:
B8BQT3_THAPS
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.673
B8CEC4_THAPS
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.673
trpAB
Tryptophane synthase.
  
  
 0.636
ADH1
Probable alcohol dehydrogenase.
  
 0.629
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.621
B8C7K7_THAPS
Uncharacterized protein.
 
 
 0.613
TMS1
Possible thymidylate synthase.
  
  
 0.552
B8C648_THAPS
Malate synthase; Belongs to the malate synthase family.
  
  
 0.547
CSN1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.540
B8C9P1_THAPS
Indole-3-glycerol-phosphate synthase.
  
  
 0.529
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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