STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_263191ArfGEF. (995 aa)    
Predicted Functional Partners:
B8C0S3_THAPS
Guanyl nucleotide exchange factor.
  
 
0.954
ARF3
Adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
ARF5
ADP-ribosylation factor like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.551
ARF1
Adp-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.551
B8BTM0_THAPS
J domain-containing protein.
   
 
 0.405
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.