STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAPS_2901860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (598 aa)    
Predicted Functional Partners:
B8CE55_THAPS
G domain-containing protein.
   
 
 0.996
eIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.994
RL10
RL10, ribosomal protein 10 60S large ribosomal subunit.
    
 
 0.990
B8C624_THAPS
Uncharacterized protein.
   
 
 0.990
RL30
RL30, ribosomal protein 30 60S large ribosomal subunit.
   
 
 0.989
B8BZ28_THAPS
C2H2-type domain-containing protein.
   
 
 0.988
RL23a
RL23a, ribosomal protein 23a 60S large ribosomal subunit.
   
 
 0.981
RL5
RL5, ribosomal protein 5, 60S large ribosomal subunit.
   
 
 0.976
RL3
RL3, ribosomal protein 3, 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.973
RL24
RL24, ribosomal protein 24 60S large ribosomal subunit.
   
 
 0.954
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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