STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BQ59_THAPSMitochondrial inner membrane protease subunit. (153 aa)    
Predicted Functional Partners:
B8CEM5_THAPS
Uncharacterized protein.
    
 0.825
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.803
B8C1V5_THAPS
Uncharacterized protein.
   
 0.786
B8CCG8_THAPS
Uncharacterized protein.
   
 0.783
B8BUI3_THAPS
Uncharacterized protein.
   
 0.768
B8BQ09_THAPS
Uncharacterized protein.
    
 0.762
B8C5P0_THAPS
Uncharacterized protein.
   
 0.760
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.633
LigaseIV
ATP dependent DNA ligase.
  
 
 0.605
B8C4H9_THAPS
ATP dependent DNA ligase 1.
     
 0.493
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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