STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BYU5_THAPSFtsJ domain-containing protein. (208 aa)    
Predicted Functional Partners:
B8BPY1_THAPS
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.997
B8C8D6_THAPS
Uncharacterized protein.
   
 0.997
B8BRY7_THAPS
RRM domain-containing protein.
   
 
 0.996
B8CG69_THAPS
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.996
B8BSJ7_THAPS
Protein MAK16 homolog; Belongs to the MAK16 family.
   
  0.994
RL30
RL30, ribosomal protein 30 60S large ribosomal subunit.
   
 
 0.994
B8C4R4_THAPS
BRCT domain-containing protein.
   
   0.994
B8BUG1_THAPS
CBF domain-containing protein.
   
 
 0.991
B8C0X6_THAPS
Uncharacterized protein.
   
 0.990
B8C4B1_THAPS
Uncharacterized protein.
  
 0.990
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.