STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8BZW6_THAPSUncharacterized protein. (529 aa)    
Predicted Functional Partners:
B8C2B9_THAPS
ABC transporter.
   
 0.698
THAPS_13175
ABC transporter, ATP binding protein.
    
 0.692
B8C6H8_THAPS
ABC transporter.
    
 0.692
B8LD27_THAPS
Predicted protein.
  
     0.520
THAPS_263198
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
   
  
 0.502
B8BZJ7_THAPS
Uncharacterized protein.
  
    0.476
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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