STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C2L4_THAPSLETM1 domain-containing protein. (1161 aa)    
Predicted Functional Partners:
RS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.513
RL8
RL8, ribosomal protein 8.
    
 
 0.511
RL17
RL17, ribosomal protein 17-like 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.499
RSP1
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.496
RS13
RS13, ribosomal protein 13 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS15 family.
   
   0.493
RL13A
RL13A, ribosomal protein 13A 60S large ribosomal subunit.
   
   0.492
RL10
RL10, ribosomal protein 10 60S large ribosomal subunit.
   
   0.491
RL5
RL5, ribosomal protein 5, 60S large ribosomal subunit.
    
   0.489
THAPS_269961
Predicted protein.
    
   0.489
RL3
RL3, ribosomal protein 3, 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL3 family.
    
   0.489
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.