STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C308_THAPSUncharacterized protein. (1381 aa)    
Predicted Functional Partners:
B8CB79_THAPS
MPN domain-containing protein.
   
 0.954
B8BQU9_THAPS
ZZ-type domain-containing protein.
   
 0.934
B8BTN6_THAPS
Uncharacterized protein.
   
 0.929
B8CEP8_THAPS
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.928
TF2D2
Transcription factor IID, TATA box binding protein.
    
 0.900
H4_2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.898
B8CA92_THAPS
SGF29 C-terminal domain-containing protein.
    
 0.880
B8C5X9_THAPS
TFIID_20kDa domain-containing protein.
   
 0.873
B8BW09_THAPS
TAF6_C domain-containing protein.
   
 0.865
B8BUX4_THAPS
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.835
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.